Link to F54C8.1RNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to F54C8.2Link to F54C8.3Link to F54C8.1RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to F58A4.3geneMap
Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 
RNAi Experiment: TH:322C11 Ace View of TH:322C11
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F54C8.1
Description of "F54C8.1"  Associated GO Term : oxidoreductase activity
KOG Annotation  3-hydroxyacyl-CoA dehydrogenase
What's a KOG?
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:9439711..9441009)
Transcript overlap: 897 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 834
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.888
Wormbase (BLAST) RNAi primary
External "F54C8.1" Links  Wormbase NCBI
Gene Inhibited  F54C8.3 (emb-30)
Description of "F54C8.3"  emb-30 encodes an anaphase-promoting complex/cyclosome (APC/C) component orthologous to mammalian APC-4 and Schizosaccharomyces pombe Lid1; EMB-30 is required for the metaphase-to-anaphase transition during meiosis and mitosis, for establishing anterior-posterior polarity in the early embryo, and for proper localization of germline granules and the maternally provided PAR-2 and PAR-3 proteins.
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (III:9439711..9441009)
Transcript overlap: 169 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 105
Relative score: 0.126 (Best raw score= for Gene )
Specificity index: 0.112
Wormbase (BLAST) RNAi primary
External "F54C8.3" Links  Wormbase NCBI
TH:322C11 Phenotypes Help with Phenotypes
Phenotype  WTDIC phenotype -- Embryonic development normal
TH:322C11 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  TH:322C11 (PCR_reagent)
Reference  Gonczy P et al. (2000) Nature "Functional genomic analysis of cell division in C. elegans using RNAi of genes on ...."
Delivery Method  Injection
Date  2000-11-16
Gene Plot of F54C8.3 Browse using GBrowse
Gene Graph
Gene Plot of F54C8.1 Browse using GBrowse
Gene Graph