Link to Y119D3B.5Link to Y119D3B.19RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to ZC47.7geneMap Link to Y119D3B.3Link to ZC47.7RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y119D3B.19geneMap Link to Y119D3B.5RNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentLink to Y119D3B.3geneMap Link to Y119D3B.3RNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentLink to Y119D3B.5geneMap Link to Y82E9BL.18RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to Y82E9BL.18RNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
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RNAi Experiment: TH:323C11_1 Ace View of TH:323C11_1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y119D3B.19
Description of "Y119D3B.19"  This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:1256800..1258483)
Transcript overlap: 853 nt
Explain types of evidence for RNAi inhibition
External "Y119D3B.19" Links  Wormbase NCBI
Gene Inhibited  ZC47.7
Description of "ZC47.7"  This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
Evidence for Inhibition 
ePCR Status: Top85_percentile_ePCR (III:1265241..1266924)
Transcript overlap: 834 nt
Explain types of evidence for RNAi inhibition
External "ZC47.7" Links  Wormbase NCBI
Gene Inhibited  Y119D3B.5 (srz-8)
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (III:1256800..1258483)
Transcript overlap: 120 nt
Explain types of evidence for RNAi inhibition
External "Y119D3B.5" Links  Wormbase NCBI
Gene Inhibited  Y119D3B.3 (srz-9)
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (III:1265241..1266924)
Transcript overlap: 120 nt
Explain types of evidence for RNAi inhibition
External "Y119D3B.3" Links  Wormbase NCBI
Gene Inhibited  Y82E9BL.9
Evidence for Inhibition 
Sliding Window Raw score: 62
Relative score: 0.323 (Best raw score= for Gene )
Specificity index: 0.244
Wormbase (BLAST) RNAi primary
External "Y82E9BL.9" Links  Wormbase NCBI
Gene Inhibited  Y82E9BL.18
Evidence for Inhibition 
Sliding Window Raw score: 192
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.756
Wormbase (BLAST) RNAi primary
External "Y82E9BL.18" Links  Wormbase NCBI
TH:323C11_1 Phenotypes Help with Phenotypes
Phenotype  WTDIC phenotype -- Embryonic development normal
TH:323C11_1 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  TH:323C11_1 (PCR_reagent)
Remark  This RNAi has multiple targets in the genome, see also RNAi: TH:323C11_2
Reference  Gonczy P et al. (2000) Nature "Functional genomic analysis of cell division in C. elegans using RNAi of genes on ...."
Delivery Method  Injection
Date  2000-11-16
Gene Plot of Y119D3B.19 Browse using GBrowse
Gene Graph
Gene Plot of Y82E9BL.9 Browse using GBrowse
Gene Graph
Gene Plot of Y119D3B.5 Browse using GBrowse
Gene Graph
Gene Plot of Y119D3B.3 Browse using GBrowse
Gene Graph
Gene Plot of ZC47.7 Browse using GBrowse
Gene Graph
Gene Plot of Y82E9BL.18 Browse using GBrowse
Gene Graph