RNAi Experiment: TH:323C11_2 |
Ace View of TH:323C11_2
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Genes Inhibited |
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Gene Inhibited |
Y119D3B.19 |
Description of "Y119D3B.19" |
This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. |
Evidence for Inhibition |
ePCR |
Status: Best_ePCR (III:1256800..1258483)
Transcript overlap: 853 nt |
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Sliding Window |
Raw score: 790
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.46 |
Wormbase (BLAST) |
RNAi primary |
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External "Y119D3B.19" Links |
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Gene Inhibited |
ZC47.7 |
Description of "ZC47.7" |
This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. |
Evidence for Inhibition |
ePCR |
Status: Top85_percentile_ePCR (III:1265241..1266924)
Transcript overlap: 834 nt |
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Sliding Window |
Raw score: 749
Relative score: 0.948 (Best raw score= for Gene )
Specificity index: 0.436 |
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External "ZC47.7" Links |
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Gene Inhibited |
Y119D3B.5 (srz-8) |
Evidence for Inhibition |
ePCR |
Status: Bottom50_percentile_ePCR (III:1256800..1258483)
Transcript overlap: 120 nt |
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Sliding Window |
Raw score: 78
Relative score: 0.099 (Best raw score= for Gene )
Specificity index: 0.045 |
Wormbase (BLAST) |
RNAi primary |
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External "Y119D3B.5" Links |
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Gene Inhibited |
Y119D3B.3 (srz-9) |
Evidence for Inhibition |
ePCR |
Status: Bottom50_percentile_ePCR (III:1265241..1266924)
Transcript overlap: 120 nt |
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Sliding Window |
Raw score: 99
Relative score: 0.125 (Best raw score= for Gene )
Specificity index: 0.058 |
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External "Y119D3B.3" Links |
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TH:323C11_2 Phenotypes |
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Phenotype |
WTDIC phenotype -- Embryonic development normal
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TH:323C11_2 Experiment Details |
Ace View |
Laboratory |
TH |
RNAi Reagent & Type |
TH:323C11_2 (PCR_reagent) |
Remark |
This RNAi has multiple targets in the genome, see also RNAi: TH:323C11_1 |
Reference |
Gonczy P et al. (2000) Nature "Functional genomic analysis of cell division in C. elegans using RNAi of genes on ...." |
Delivery Method |
Injection |
Date |
2000-11-16 |
Gene Plot of Y119D3B.19 |
Browse using GBrowse
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Gene Plot of Y119D3B.5 |
Browse using GBrowse
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Gene Plot of Y119D3B.3 |
Browse using GBrowse
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Gene Plot of ZC47.7 |
Browse using GBrowse
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