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RNAi Experiment: TH:325C1 Ace View of TH:325C1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T16H12.11
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:10087433..10089099)
Transcript overlap: 749 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 623
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.635
Wormbase (BLAST) RNAi primary
External "T16H12.11" Links  Wormbase NCBI
Gene Inhibited  T16H12.4
Description of "T16H12.4"  Associated GO Term : DNA repair
KOG Annotation  RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit SSL1
What's a KOG?
Evidence for Inhibition 
ePCR Status: Top50_percentile_ePCR (III:10087433..10089099)
Transcript overlap: 400 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 358
Relative score: 0.575 (Best raw score= for Gene )
Specificity index: 0.365
Wormbase (BLAST) RNAi primary
External "T16H12.4" Links  Wormbase NCBI
TH:325C1 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
TH:325C1 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  TH:325C1 (PCR_reagent)
Remark  Phenotype comment -- Not yet confirmed by independent RNA
Reference  Gonczy P et al. (2000) Nature "Functional genomic analysis of cell division in C. elegans using RNAi of genes on ...."
Date  2000-11-16
Gene Plot of T16H12.4 Browse using GBrowse
Gene Graph
Gene Plot of T16H12.11 Browse using GBrowse
Gene Graph