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RNAi Experiment: TH:326E6 Ace View of TH:326E6
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y39A1A.13
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:10645970..10647549)
Transcript overlap: 691 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 566
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.67
Wormbase (BLAST) RNAi primary
External "Y39A1A.13" Links  Wormbase NCBI
Gene Inhibited  Y39A1A.12
Description of "Y39A1A.12"  Y39A1A.12 encodes a homolog of origin recognition complex 1, which is also a distant paralog of CDC-6; both Y39A1A.12 and CDC-6 encode homologs of the origin complex which, in yeast, controls the start of DNA replication; whether either Y39A1A.12 or CDC-6 are required for this function in C. elegans, individually or in parallel, is unknown.
KOG Annotation  Origin recognition complex, subunit 1, and related proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Top50_percentile_ePCR (III:10645970..10647549)
Transcript overlap: 384 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 279
Relative score: 0.493 (Best raw score= for Gene )
Specificity index: 0.33
External "Y39A1A.12" Links  Wormbase NCBI
TH:326E6 Phenotypes Help with Phenotypes
Adult  Unc
TH:326E6 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  TH:326E6 (PCR_reagent)
Remark  Phenotype comment -- Not yet confirmed by independent RNA
Reference  Gonczy P et al. (2000) Nature "Functional genomic analysis of cell division in C. elegans using RNAi of genes on ...."
Date  2000-11-16
Gene Plot of Y39A1A.13 Browse using GBrowse
Gene Graph
Gene Plot of Y39A1A.12 Browse using GBrowse
Gene Graph