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RNAi Experiment: TH:327D3 Ace View of TH:327D3
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  F42G9.9 (ptl-1)
Description of "F42G9.9"  ptl-1 encodes a microtubule-binding protein that is homologous to members of the tau/MAP2/MAP4 subfamily of microtubule-associated proteins (OMIM:157140, abnormal aggregates of hyperphosphorylated tau are associated with several neurodegenerative disorders, including Alzheimer's disease, Pick's disease, and corticobasal degeneration); by homology, PTL-1 is predicted to promote microtubule assembly and stability, and to play a role in maintaining neuronal integrity and axonal transport; in vitro, bacterially expressed PTL-1 can bind microtubules; ptl-1 mRNA is expressed at highest levels in the embryo and early larval stages, while PTL-1 is detected in embryonic hypodermis and head neurons and then in the mechanosensory neurons, ALML, ALMR, AVM, PLML, and PLMR, in larvae and adults; as loss of ptl-1 function via mutation or large-scale RNAi screens does not result in any obvious abnormalities, the precise role of PTL-1 in C. elegans development and/or behavior is not yet known.
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:768484..769312)
Transcript overlap: 644 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 581
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "F42G9.9" Links  Wormbase NCBI
TH:327D3 Phenotypes Help with Phenotypes
Phenotype  WTDIC phenotype -- Embryonic development normal
TH:327D3 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  TH:327D3 (PCR_reagent)
Reference  Gonczy P et al. (2000) Nature "Functional genomic analysis of cell division in C. elegans using RNAi of genes on ...."
Delivery Method  Injection
Date  2000-11-16
Gene Plot of F42G9.9 Browse using GBrowse
Gene Graph