RNAi Experiment: TH:330A11 |
Ace View of TH:330A11
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Genes Inhibited |
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Gene Inhibited |
ZK652.1 (snr-5) |
Description of "ZK652.1" |
snr-5 encodes an ortholog of human small nuclear ribonucleoprotein SmF, a protein that forms part of a heptameric complex required for biogenesis and function of the snRNPs that catalyze mRNA splicing; in combination with the gene that encodes the human SmE and SmG orthologs (snr-6 and snr-7, respectively), snr-5 affects embryonic viability and nuclear association and localization of P granules in embryos, based on an RNAi assay; affects embryonic and larval viability based on large-scale RNAi assays; snr-5 is expressed in embryos and adult gonads. |
KOG Annotation  |
Small nuclear ribonucleoprotein (snRNP) SMF
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Evidence for Inhibition |
ePCR |
Status: Unique_ePCR (III:7861450..7862403)
Transcript overlap: 258 nt |
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Sliding Window |
Raw score: 195
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene) |
Wormbase (BLAST) |
RNAi primary |
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External "ZK652.1" Links |
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TH:330A11 Phenotypes |
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Embryonic |
Emb Penetrance None reported |
TH:330A11 Experiment Details |
Ace View |
Laboratory |
TH |
RNAi Reagent & Type |
TH:330A11 (PCR_reagent) |
Remark |
Phenotype comment -- Not yet confirmed by independent RNA |
Reference |
Gonczy P et al. (2000) Nature "Functional genomic analysis of cell division in C. elegans using RNAi of genes on ...." |
Date |
2000-11-16 |
Gene Plot of ZK652.1 |
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