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RNAi Experiment: TH:331G6 Ace View of TH:331G6
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y49E10.1 (rpt-6)
Description of "Y49E10.1"  rpt-6 encodes a triple A ATPase that is a subunit of the 26S proteasome 19S regulatory particle (RP) base subcomplex; RPT-6 is required for embryonic and larval development and by homology, is predicted to function in unfolding protein substrates and translocating them into the core proteolytic particle (CP) of the proteasome.
KOG Annotation  26S proteasome regulatory complex, ATPase RPT6
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:12370338..12371998)
Transcript overlap: 915 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 837
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y49E10.1" Links  Wormbase NCBI
TH:331G6 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
TH:331G6 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  TH:331G6 (PCR_reagent)
Remark  Phenotype comment -- Confirmed with independent dsRNA (Y49E10.1-RNA2; less penetrant DIC phenotype); not confirmed with third dsRNA (Y49E10.1-RNA3).
Reference  Gonczy P et al. (2000) Nature "Functional genomic analysis of cell division in C. elegans using RNAi of genes on ...."
Date  2000-11-16
Gene Plot of Y49E10.1 Browse using GBrowse
Gene Graph