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RNAi Experiment: TH:333E1 Ace View of TH:333E1
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y111B2A.3
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:12495244..12496832)
Transcript overlap: 734 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 650
Relative score: 0.621 (Best raw score=650 for Gene Y111B2A.3)
Specificity index: 0.316
Wormbase (BLAST) RNAi primary
External "Y111B2A.3" Links  Wormbase NCBI
Gene Inhibited  Y111B2A.1
Description of "Y111B2A.1"  Associated GO Term : protein kinase activity
KOG Annotation  LAMMER dual specificity kinases
What's a KOG?
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (III:12495244..12496832)
Transcript overlap: 210 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 147
Relative score: 0.346 (Best raw score= for Gene )
Specificity index: 0.176
Wormbase (BLAST) RNAi primary
External "Y111B2A.1" Links  Wormbase NCBI
Gene Inhibited  Y111B2A.2
Evidence for Inhibition 
ePCR Status: Top50_percentile_ePCR (III:12495244..12496832)
Transcript overlap: 509 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 425
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.508
Wormbase (BLAST) RNAi primary
External "Y111B2A.2" Links  Wormbase NCBI
TH:333E1 Phenotypes Help with Phenotypes
Phenotype  WTDIC phenotype -- Embryonic development normal
TH:333E1 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  TH:333E1 (PCR_reagent)
Reference  Gonczy P et al. (2000) Nature "Functional genomic analysis of cell division in C. elegans using RNAi of genes on ...."
Delivery Method  Injection
Date  2000-11-16
Gene Plot of Y111B2A.2 Browse using GBrowse
Gene Graph
Gene Plot of Y111B2A.1 Browse using GBrowse
Gene Graph
Gene Plot of Y111B2A.3 Browse using GBrowse
Gene Graph