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RNAi Experiment: TH:333a5 Ace View of TH:333a5
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  H06I04.4 (ubl-1)
Description of "H06I04.4"  ubl-1 encodes a protein similar to Drosophila ubiquitin/ ribosomal protein S27a that affects body length, fertility, and larval viability.
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:3068997..3070703)
Transcript overlap: 215 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 183
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.599
Wormbase (BLAST) RNAi primary
External "H06I04.4" Links  Wormbase NCBI
Gene Inhibited  H06I04.3
Evidence for Inhibition 
ePCR Status: Top50_percentile_ePCR (III:3068997..3070703)
Transcript overlap: 137 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 116
Relative score: 0.671 (Best raw score= for Gene )
Specificity index: 0.401
Wormbase (BLAST) RNAi primary
External "H06I04.3" Links  Wormbase NCBI
TH:333a5 Phenotypes Help with Phenotypes
Adult  Ste
TH:333a5 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  TH:333a5 (PCR_reagent)
Remark  Phenotype comment -- Semi-sterile. Phenotype confimed with three independent dsRNA (H06I04.4-RNA2, H06I04.4-RNA3 and H06I04.4-RNA4; similar phenotypes).
Reference  Gonczy P et al. (2000) Nature "Functional genomic analysis of cell division in C. elegans using RNAi of genes on ...."
Date  2000-11-16
Gene Plot of H06I04.3 Browse using GBrowse
Gene Graph
Gene Plot of H06I04.4 Browse using GBrowse
Gene Graph