Link to Y119D3B.3Link to ZC47.7RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to Y119D3B.19geneMap Link to ZC47.6RNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to ZC47.3Link to ZC47.4Link to ZC47.14geneMap Link to Y119D3B.5Link to Y119D3B.19RNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to ZC47.7geneMap
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RNAi Experiment: TH:335B6 Ace View of TH:335B6
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  ZC47.7
Description of "ZC47.7"  This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
Evidence for Inhibition 
ePCR Status: Best_ePCR (III:1266275..1267515)
Transcript overlap: 526 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 463
Relative score: 0.957 (Best raw score= for Gene )
Specificity index: 0.433
Wormbase (BLAST) RNAi primary
External "ZC47.7" Links  Wormbase NCBI
Gene Inhibited  ZC47.6
Description of "ZC47.6"  This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
Evidence for Inhibition 
ePCR Status: Bottom50_percentile_ePCR (III:1266275..1267515)
Transcript overlap: 123 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 123
Relative score: 0.254 (Best raw score= for Gene )
Specificity index: 0.115
Wormbase (BLAST) RNAi primary
External "ZC47.6" Links  Wormbase NCBI
Gene Inhibited  Y119D3B.19
Description of "Y119D3B.19"  This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction.
Evidence for Inhibition 
Sliding Window Raw score: 484
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.452
External "Y119D3B.19" Links  Wormbase NCBI
TH:335B6 Phenotypes Help with Phenotypes
Phenotype  WTDIC phenotype -- Embryonic development normal
TH:335B6 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  TH:335B6 (PCR_reagent)
Reference  Gonczy P et al. (2000) Nature "Functional genomic analysis of cell division in C. elegans using RNAi of genes on ...."
Delivery Method  Injection
Date  2000-11-16
Gene Plot of ZC47.6 Browse using GBrowse
Gene Graph
Gene Plot of Y119D3B.19 Browse using GBrowse
Gene Graph
Gene Plot of ZC47.7 Browse using GBrowse
Gene Graph