Link to Y1A5A.1RNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentLink to C47A4.4geneMap Link to M01E5.2RNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap Link to T07C12.14RNAiRNAiRNAiRNAiRNAiRNAiRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap RNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentRNAi ReagentgeneMap
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RNAi Experiment: TH:339G2 Ace View of TH:339G2
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y1A5A.1
Description of "Y1A5A.1"  Associated GO Term : zinc ion binding
KOG Annotation  Adaptor protein Enigma and related PDZ-LIM proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (III:3985650..3987802)
Transcript overlap: 578 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 536
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.574
Wormbase (BLAST) RNAi primary
External "Y1A5A.1" Links  Wormbase NCBI
Gene Inhibited  M01E5.2
Description of "M01E5.2"  Associated GO Term : GTP binding
KOG Annotation  Predicted GTP-binding protein (ODN superfamily)
What's a KOG?
Evidence for Inhibition 
Sliding Window Raw score: 211
Relative score: 0.394 (Best raw score= for Gene )
Specificity index: 0.226
External "M01E5.2" Links  Wormbase NCBI
Gene Inhibited  T07C12.3 (srj-35)
Evidence for Inhibition 
Sliding Window Raw score: 83
Relative score: 0.155 (Best raw score= for Gene )
Specificity index: 0.089
External "T07C12.3" Links  Wormbase NCBI
Gene Inhibited  C47A4.4
Evidence for Inhibition 
Sliding Window Raw score: 104
Relative score: 0.194 (Best raw score= for Gene )
Specificity index: 0.111
External "C47A4.4" Links  Wormbase NCBI
TH:339G2 Phenotypes Help with Phenotypes
Phenotype  WTDIC phenotype -- Embryonic development normal
TH:339G2 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  TH:339G2 (PCR_reagent)
Reference  Gonczy P et al. (2000) Nature "Functional genomic analysis of cell division in C. elegans using RNAi of genes on ...."
Delivery Method  Injection
Date  2000-11-16
Gene Plot of M01E5.2 Browse using GBrowse
Gene Graph
Gene Plot of Y1A5A.1 Browse using GBrowse
Gene Graph
Gene Plot of T07C12.3 Browse using GBrowse
Gene Graph
Gene Plot of C47A4.4 Browse using GBrowse
Gene Graph