RNAi Experiment: TH:340B12 |
Ace View of TH:340B12
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Genes Inhibited |
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Gene Inhibited |
T12B5.8 |
Description of "T12B5.8" |
This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. |
Evidence for Inhibition |
ePCR |
Status: Unique_ePCR (III:940908..941857)
Transcript overlap: 796 nt |
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Sliding Window |
Raw score: 733
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 0.554 |
Wormbase (BLAST) |
RNAi primary |
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External "T12B5.8" Links |
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Gene Inhibited |
C29F9.11 |
Evidence for Inhibition |
Sliding Window |
Raw score: 225
Relative score: 0.307 (Best raw score= for Gene )
Specificity index: 0.17 |
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External "C29F9.11" Links |
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Gene Inhibited |
C29F9.10 |
Evidence for Inhibition |
Sliding Window |
Raw score: 171
Relative score: 0.233 (Best raw score= for Gene )
Specificity index: 0.129 |
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External "C29F9.10" Links |
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Gene Inhibited |
T12B5.10 |
Description of "T12B5.10" |
This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. |
Evidence for Inhibition |
Sliding Window |
Raw score: 130
Relative score: 0.177 (Best raw score= for Gene )
Specificity index: 0.098 |
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External "T12B5.10" Links |
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Gene Inhibited |
T12B5.6 |
Description of "T12B5.6" |
This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. |
Evidence for Inhibition |
Sliding Window |
Raw score: 64
Relative score: 0.087 (Best raw score= for Gene )
Specificity index: 0.048 |
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External "T12B5.6" Links |
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TH:340B12 Phenotypes |
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Phenotype |
WTDIC phenotype -- Embryonic development normal
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TH:340B12 Experiment Details |
Ace View |
Laboratory |
TH |
RNAi Reagent & Type |
TH:340B12 (PCR_reagent) |
Reference |
Gonczy P et al. (2000) Nature "Functional genomic analysis of cell division in C. elegans using RNAi of genes on ...." |
Delivery Method |
Injection |
Date |
2000-11-16 |
Gene Plot of C29F9.11 |
Browse using GBrowse
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Gene Plot of T12B5.10 |
Browse using GBrowse
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Gene Plot of C29F9.10 |
Browse using GBrowse
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Gene Plot of T12B5.6 |
Browse using GBrowse
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Gene Plot of T12B5.8 |
Browse using GBrowse
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