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RNAi Experiment: [cgc5655]:daf-2:Y57G11C.17 Ace View of [cgc5655]:daf-2:Y57G11C.17
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  Y57G11C.17 (hhat-2)
KOG Annotation  Acyltransferase required for palmitoylation of Hedgehog (Hh) family of secreted signaling proteins
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (IV:14826663..14827812)
Transcript overlap: 1047 nt		 Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 984
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "Y57G11C.17" Links  Wormbase NCBI
Gene Inhibited  Y57G11C.16 (rps-18)
Description of "Y57G11C.16"  rps-18 encodes a small ribosomal subunit S18 protein.
KOG Annotation  Ribosomal protein S18
What's a KOG?
Evidence for Inhibition 
ePCR Transcript overlap: 12 nt Explain types of evidence for RNAi inhibition
External "Y57G11C.16" Links  Wormbase NCBI
[cgc5655]:daf-2:Y57G11C.17 Phenotypes Help with Phenotypes
Phenotype  WTRNAi causes no change in fat content
[cgc5655]:daf-2:Y57G11C.17 Experiment Details Ace View
Laboratory  GR
RNAi Reagent & Type  sjj_Y57G11C.17 (PCR_reagent)
Strain  daf-2(e1370)
Reference  Ashrafi K et al. (2003) Nature "Genome-wide RNAi analysis of Caenorhabditis elegans fat regulatory ...."
Delivery Method  Bacterial_feeding
Date  2003-1-10
Gene Plot of Y57G11C.17 Browse using GBrowse
Gene Graph
Gene Plot of Y57G11C.16 Browse using GBrowse
Gene Graph