CDS: B0395.1
B0395.1 | SMap | S_parent | Sequence | SUPERLINK_CB_X | |
---|---|---|---|---|---|
Structure | Source_exons (12) | ||||
DB_info | Database | TREMBL | O01995_CAEEL | ||
TrEMBL_AC | O01995 | ||||
NDB | GI_number | 21615497 | |||
NCBI | RefSeq | NM_078221 | |||
Protein_id (2) | |||||
DB_remark | C. elegans NHX-1 protein; contains similarity to Pfam domain PF00999 (Sodium/hydrogen exchanger family)contains similarity to Interpro domains IPR004709 (Sodium/hydrogen exchanger subfamily), IPR006153 (Sodium/hydrogen exchanger) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | B0395.1 | |||
Corresponding_transcript | B0395.1 | ||||
Corresponding_protein | WP:CE30842 | ||||
Corresponding_PCR_product (2) | |||||
Corresponding_RNAi_reagent | Cenix:58-c4 | ||||
sjj_B0395.1 | |||||
Matching_cDNA | yk320d3.5 | Inferred_automatically | transcript_builder.pl | ||
OSTF220G2_1 | Inferred_automatically | transcript_builder.pl | |||
yk320d3.3 | Inferred_automatically | transcript_builder.pl | |||
AF497823 | Inferred_automatically | transcript_builder.pl | |||
RNAi_result | Cenix:58-c4 | ||||
JA:B0395.1 | |||||
Simmer:B0395.1:Repeat_a | |||||
Simmer:B0395.1:Repeat_b | |||||
Simmer:B0395.1:Screen | |||||
WB_RNAi_result | SA:yk320d3 | ||||
JA:B0395.1 | |||||
Simmer:B0395.1:Repeat_a | |||||
Simmer:B0395.1:Repeat_b | |||||
Simmer:B0395.1:Screen | |||||
Cenix:58-c4 | |||||
GO_term (8) | |||||
Variation | tm743 | ||||
Microarray_results | SMD_B0395.1 | ||||
Brief_identification | Sodium/Proton antiporter | ||||
Remark | [020611 dl] Modified prediction based on cDNA data. Altered position of intron 2 in line with cDNA AF497823 | ||||
Method | curated |