Go to RNAiDB Home Adult Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie Wild-type C. elegans Movie
 

CDS: C06G4.2a   

C06G4.2aSMapS_parentSequenceC06G4
Structure Source_exons (14)
DB_info (3)
Origin (2)
Properties Coding CDS
Prediction_statusConfirmed
IsoformAccession_evidenceEMBL BJ124914
Visible GeneC06G4.2
Corresponding_transcript C06G4.2a.1
C06G4.2a.2
Corresponding_proteinWP:CE37743
Corresponding_PCR_product (8)
Matching_cDNA yk1317a01.5 Inferred_automaticallytranscript_builder.pl
yk1110g05.5 Inferred_automaticallytranscript_builder.pl
yk11f10.5 Inferred_automaticallytranscript_builder.pl
yk1099f01.5 Inferred_automaticallytranscript_builder.pl
WB_RNAi_result TH:302E9
TH:309H9
JA:C06G4.2
[cgc5513]:clp-1:1
[cgc5513]:clp-1:2
[cgc5513]:clp-1:3
[cgc5513]:clp-1:4
MV_SV:mv_C06G4.2
Cenix:309-h9
Cenix:302-e9
GO_term (5)
Variation (5)
Microarray_results (7)
Brief_identificationcalpain
Remark added new last intron and exon based on EST data - 01-05-07 js
added the first two exons and exon 12 based on EST data - 02-04-01 js
SL1 trans-spliced; see yk1317a01.5
yk1322d11.3 indicates there is an intron in the 3' UTR but the splices sites are very unusual - 02-04-01 js
removed an internal exon based on EST data(yk1317a01.3)[20041110 po]
this isoform is based on EMBL accession BJ124914
Associated_featureWBsf002547
Methodcurated