CDS: C34H4.4b
C34H4.4b | SMap | S_parent | Sequence | C34H4 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 141 | ||
198 | 941 | ||||
DB_info | Database | TREMBL | Q86S35_CAEEL | ||
TrEMBL_AC | Q86S35 | ||||
NDB | GI_number | 28476827 | |||
NCBI | RefSeq | NM_182305 | |||
Protein_id | C34H4 | AAO44912 | 1 | ||
DB_remark | C. elegans COL-107 protein; contains similarity to Pfam domains PF01484 (Nematode cuticle collagen N-terminal domain), PF01391 (Collagen triple helix repeat (20 copies))(2)contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008161 (Collagen helix repeat), IPR008160 (Collagen triple helix repeat) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Accession_evidence | EMBL | BJ140867 | ||
Visible | Gene | C34H4.4 | |||
Corresponding_transcript | C34H4.4b | ||||
Corresponding_protein | WP:CE20539 | ||||
Corresponding_PCR_product (3) | |||||
Corresponding_RNAi_reagent | Cenix:234-g5 | ||||
sjj_C34H4.4 | |||||
Matching_cDNA (25) | |||||
RNAi_result | Cenix:234-g5 | ||||
JA:C34H4.4 | |||||
WB_RNAi_result | SA:yk207e2 | ||||
JA:C34H4.4 | |||||
MV_SV:mv_C34H4.4 | |||||
Cenix:234-g5 | |||||
GO_term (3) | |||||
Microarray_results | SMD_C34H4.4 | ||||
172803_x_at | |||||
Aff_C34H4.4 | |||||
Remark | this isoform is based on EMBL accession BJ140867 | ||||
Method | curated |