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CDS: F10C2.6   

F10C2.6SMapS_parentSequenceF10C2
Structure Source_exons (7)
DB_info Database TREMBL P90831_CAEEL
TrEMBL_AC P90831
NDB GI_number 24817292
NCBI RefSeq NM_073618
Protein_idF10C2 CAB040812
DB_remarkC. elegans DRS-2 protein; contains similarity to Pfam domains PF01336 (OB-fold nucleic acid binding domain), PF00152 (tRNA synthetases class II (D, K and N))contains similarity to Interpro domains IPR006195 (Aminoacyl-transfer RNA synthetase, class II), IPR004364 (tRNA synthetase, class II (D, K and N)), IPR004524 (Aspartyl-tRNA synthetase bacterial/mitochondrial type), IPR012340 (Nucleic acid-binding, OB-fold, subgroup), IPR004365 (nucleic acid binding, OB-fold, tRNA/helicase-type), IPR002312 (Aspartyl-tRNA synthetase, class IIb)
Origin From_laboratoryHX
SpeciesCaenorhabditis elegans
Properties Coding CDS
Prediction_statusPartially_confirmed
Visible GeneF10C2.6
Corresponding_transcriptF10C2.6
Corresponding_proteinWP:CE31906
Corresponding_PCR_product cenix:160-a4
mv_F10C2.6
sjj_F10C2.6
Corresponding_RNAi_reagent Cenix:160-a4
sjj_F10C2.6
Matching_cDNA (8)
RNAi_result JA:F10C2.6
Cenix:160-a4
WB_RNAi_result SA:yk250e3
JA:F10C2.6
MV_SV:mv_F10C2.6
Cenix:160-a4
GO_term (8)
Microarray_results SMD_F10C2.6
190734_at
Aff_F10C2.6
Brief_identificationAspartyl-tRNA synthetase
Remark [010618 kj] EST yk250e3 matches both F10C2.5 and .6 which seem to be co-transcribed (not merged due to different protein homologies)
[020920 dl] Modified prediction based on EST data. Added 5' exon and changed splice donor from exon 2
[020920 dl] Discepency between yk856c02 and this prediction. Would make a truncated isoform/pseudogene
Associated_featureWBsf014571
Methodcurated