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CDS: F43C1.3   

F43C1.3SMapS_parentSequenceY44F5A
Structure Source_exons 1259
305612
DB_info Database TREMBL Q7K7S3_CAEEL
TrEMBL_AC Q7K7S3
NDB GI_number 50470581
Protein_idY44F5A CAA159812
DB_remarkcontains similarity to Pfam domain PF04438 (HIT zinc finger)contains similarity to Interpro domain IPR007529 (Zinc finger, HIT-type)
Origin From_laboratoryHX
SpeciesCaenorhabditis elegans
Properties Coding CDS
Prediction_statusConfirmed
Visible GeneF43C1.3
Corresponding_transcriptF43C1.3
Corresponding_proteinWP:CE37012
Corresponding_PCR_product cenix:308-f1
sjj_F43C1.3
mv_F43C1.3
smd_F43C1.3
Corresponding_RNAi_reagent Cenix:308-f1
sjj_F43C1.3
Matching_cDNA yk1088e03.3 Inferred_automaticallytranscript_builder.pl
yk1088e03.5 Inferred_automaticallytranscript_builder.pl
yk1193c04.5 Inferred_automaticallytranscript_builder.pl
RNAi_result Cenix:308-f1
JA:F43C1.3
Simmer:F43C1.3
WB_RNAi_result JA:F43C1.3
Simmer:F43C1.3
Cenix:308-f1
GO_termGO:0040010 IMP Inferred_automatically
Microarray_results SMD_F43C1.3:2
SMD_F43C1.3
Remark Exon 4 is quite a poor prediction, however the stronger splice sites if used create an internal stop codon.
[040707 pad] Split F43C1.3 into 3 seperate genes based on EXT data, F43C1.3 is based on multiple ESTs including yk1088e03.3, F43C1.6 is based on multiple ESTs including yk1699g05 and F43C1.7 is based on multiple protein alignments.Accession_evidenceNDB BJ134430
Associated_featureWBsf002242
Methodcurated