CDS: T25G3.3
T25G3.3 | SMap | S_parent | Sequence | T25G3 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 142 | ||
188 | 315 | ||||
366 | 761 | ||||
1214 | 1428 | ||||
1475 | 1722 | ||||
1812 | 1900 | ||||
1949 | 2119 | ||||
2169 | 2321 | ||||
DB_info | Database (3) | ||||
Protein_id | T25G3 | CAA96689 | 2 | ||
DB_remark | contains similarity to Pfam domain PF04981 (NMD3 family)contains similarity to Interpro domain IPR007064 (NMD3) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding (2) | ||||
Visible | Gene | T25G3.3 | |||
Corresponding_transcript | T25G3.3.1 | ||||
T25G3.3.2 | |||||
Corresponding_protein | WP:CE30306 | ||||
Corresponding_PCR_product (3) | |||||
Matching_cDNA (63) | |||||
WB_RNAi_result | JA:T25G3.3 | ||||
Simmer:T25G3.3:Screen_A | |||||
Simmer:T25G3.3:Screen_B | |||||
MV_SV:mv_T25G3.3 | |||||
PF:GL1_2C6 | |||||
Cenix:11-h10 | |||||
GO_term | GO:0040018 | IMP | Inferred_automatically | ||
GO:0009792 | IMP | Inferred_automatically | |||
GO:0040010 | IMP | Inferred_automatically | |||
GO:0002119 | IMP | Inferred_automatically | |||
GO:0040007 | IMP | Inferred_automatically | |||
GO:0000003 | IMP | Inferred_automatically | |||
GO:0007276 | IMP | Inferred_automatically | |||
GO:0007626 | IMP | Inferred_automatically | |||
Variation | uCE1-930 | ||||
Microarray_results | SMD_T25G3.3 | ||||
193586_at | |||||
Aff_T25G3.3 | |||||
Brief_identification | Yeast nonsense-mediated mRNA decay protein like | ||||
Remark | [020121 dl] Modified prediction based on EST yk795e01. Added in-frame intron [11136 11183] | ||||
[tsl] SL2 trans-spliced | |||||
[tsl] SL1 trans-spliced | |||||
Associated_feature | WBsf000647 | ||||
WBsf004859 | |||||
Method | curated |