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CDS: Y47G6A.10   

Y47G6A.10SMapS_parentSequenceY47G6A
Structure Source_exons (9)
DB_info Database TREMBL (2)
NDB GI_number 31746566
NCBI RefSeq NM_058764
Protein_idY47G6A AAF606602
DB_remarkC. elegans SPG-7 protein; contains similarity to Pfam domains PF06480 (FtsH Extracellular), PF00004 (ATPase family associated with various cellular activities (AAA)), PF01434 (Peptidase family M41)contains similarity to Interpro domains IPR003959 (AAA ATPase, central region), IPR005936 (Peptidase M41, FtsH), IPR003960 (AAA-protein subdomain), IPR000642 (Peptidase M41), IPR003593 (AAA ATPase), IPR011546 (Peptidase M41, FtsH extracellular)
Origin From_laboratoryRW
SpeciesCaenorhabditis elegans
Properties Coding (2)
Visible GeneY47G6A.10
Corresponding_transcriptY47G6A.10
Corresponding_proteinWP:CE34400
Corresponding_PCR_product (6)
Corresponding_RNAi_reagent Cenix:76-d12
sjj_Y47G6A_247.f
sjj_Y47G6A_247.g
Matching_cDNA yk282e3.3 Inferred_automaticallytranscript_builder.pl
OSTF090B12_1 Inferred_automaticallytranscript_builder.pl
yk282e3.5 Inferred_automaticallytranscript_builder.pl
OSTF005D2_1 Inferred_automaticallytranscript_builder.pl
OSTF005D2_2 Inferred_automaticallytranscript_builder.pl
OSTR005D2_2 Inferred_automaticallytranscript_builder.pl
OSTR090B12_1 Inferred_automaticallytranscript_builder.pl
yk316f2.5 Inferred_automaticallytranscript_builder.pl
OSTR005D2_1 Inferred_automaticallytranscript_builder.pl
cm9g11.5 Inferred_automaticallytranscript_builder.pl
RNAi_result (7)
WB_RNAi_result (9)
GO_term (15)
Variation tm537
tm1752
Microarray_results (5)
Brief_identificationATPase
Remark SL1 trans-spliced; see ESTs cm9g11 and cm21f8
removed an exon(44497 44706) based on OST data(OSTR090B12_1) [20030609 po]
Associated_featureWBsf000350
Methodcurated