CDS: Y47G6A.10
Y47G6A.10 | SMap | S_parent | Sequence | Y47G6A | |
---|---|---|---|---|---|
Structure | Source_exons (9) | ||||
DB_info | Database | TREMBL (2) | |||
NDB | GI_number | 31746566 | |||
NCBI | RefSeq | NM_058764 | |||
Protein_id | Y47G6A | AAF60660 | 2 | ||
DB_remark | C. elegans SPG-7 protein; contains similarity to Pfam domains PF06480 (FtsH Extracellular), PF00004 (ATPase family associated with various cellular activities (AAA)), PF01434 (Peptidase family M41)contains similarity to Interpro domains IPR003959 (AAA ATPase, central region), IPR005936 (Peptidase M41, FtsH), IPR003960 (AAA-protein subdomain), IPR000642 (Peptidase M41), IPR003593 (AAA ATPase), IPR011546 (Peptidase M41, FtsH extracellular) | ||||
Origin (2) | |||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | Y47G6A.10 | |||
Corresponding_transcript | Y47G6A.10 | ||||
Corresponding_protein | WP:CE34400 | ||||
Corresponding_PCR_product (6) | |||||
Corresponding_RNAi_reagent | Cenix:76-d12 | ||||
sjj_Y47G6A_247.f | |||||
sjj_Y47G6A_247.g | |||||
Matching_cDNA (10) | |||||
RNAi_result (7) | |||||
WB_RNAi_result (9) | |||||
GO_term (15) | |||||
Variation (2) | |||||
Microarray_results (5) | |||||
Brief_identification | ATPase | ||||
Remark | SL1 trans-spliced; see ESTs cm9g11 and cm21f8 | ||||
removed an exon(44497 44706) based on OST data(OSTR090B12_1) [20030609 po] | |||||
Associated_feature | WBsf000350 | ||||
Method | curated |