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RNAi Experiment: Cenix:122-a4 Ace View of Cenix:122-a4
Genes Inhibited How is RNAi inhibition determined?
Gene Inhibited  T20F5.2 (pbs-4)
Description of "T20F5.2"  pbs-4 encodes a B-type subunit of the 26S proteasome's 20S protease core particle; by homology, PBS-4 is predicted to function in ATP/ubiquitin-dependent nonlysosomal protein degradation; loss of pbs-4 activity via RNAi indicates that, in C. elegans, PBS-4 is required for embryonic, germline, and larval development.
KOG Annotation  20S proteasome, regulatory subunit beta type PSMB2/PRE1
What's a KOG?
Evidence for Inhibition 
ePCR Status: Unique_ePCR (I:3908674..3909265)
Transcript overlap: 418 nt
Explain types of evidence for RNAi inhibition
Sliding Window Raw score: 362
Relative score: 1 (This gene has the best score for this RNAi reagent)
Specificity index: 1 (RNAi reagent is specific for this gene)
Wormbase (BLAST) RNAi primary
External "T20F5.2" Links  Wormbase NCBI Phenobank 1
Cenix:122-a4 Phenotypes Help with Phenotypes
Embryonic  Emb Penetrance None reported
Phenotype  Passage Through Meiosis defective
External Movies 
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Cenix:122-a4 Experiment Details Ace View
Laboratory  TH
RNAi Reagent & Type  Cenix:122-a4 (PCR_reagent)
Remark  early embryonic: Passage Through Meiosis
Reference  Sonnichsen B et al. (2005) Nature "Full-genome RNAi profiling of early embryogenesis in Caenorhabditis ...."
Delivery Method  Injection
Date  2005-3-24
Gene Plot of T20F5.2 Browse using GBrowse
Gene Graph